Environmental DNA as a complementary tool for biodiversity monitoring: A multi-technique and multi-trophic approach to investigate cetacean distribution and feeding ecology
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65. Morato T, Hoyle SD, Allain V, Nicol SJ. Seamounts are hotspots of pelagic biodiversity in the open ocean. Proceedings of the National Academy of Sciences. 2010; 107(21):9707–9711. https://doi.org/ 10.1073/pnas.0910290107 PMID: 20448197 66. Galice G. The Continental margin off Galicia and Portugal: acoustical stratigraphy, dredge stratigraphy and structural evolution. Initial Reports of the Deep Sea Drilling Project. 1979; 47(2):633–662. 67. Gil A´ , Correia AM, Sousa-Pinto I. Records of harbor porpoise (Phocoena phocoena) in the mouth of the Douro River (northern Portugal) with presence of an anomalous white individual. Marine Biodiversity Records. 2019; 12(1). https://doi.org/10.1186/s41200-018-0160-3 68. Ferna´ ndez R, MacLeod CD, Pierce GJ, Covelo P, Lo´ pez A, Torres-Palenzuela J, et al. Inter-specific and seasonal comparison of the niches occupied by small cetaceans off north-west Iberia. Continental Shelf Research. 2013; 64:88–98. https://doi.org/10.1016/j.csr.2013.05.008 69. Torres-Pereira A, Ferreira M, Eira C, Lo´pez A, Sequeira M. Phocoena phocoena boto. In: Mathias ML, Fonseca C, Rodrigues L, Grilo C, Lopes-Fernandes M, Palmeirim JM, et al., editors. Livro Vermelho dos Mamı´feros em Portugal Continental. FCiências.ID, ICNF, Lisboa; 2023. 70. Miya M, Gotoh RO, Sado T. MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples. Fisheries Science. 2020; 86(6):939–970. https://doi.org/10.1007/s12562-020-01461-8
71. Rojahn J, Gleeson DM, Furlan E, Haeusler T, Bylemans J. Improving the detection of rare native fish species in environmental DNA metabarcoding surveys. Aquatic Conservation. 2021; 31(4):990–997. https://doi.org/10.1002/aqc.3514 72. Visser F, Merten VJ, Bayer T, Oudejans MG, De Jonge DSW, Puebla O, et al. Deep-sea predator niche segregation revealed by combined cetacean biologging and eDNA analysis of cephalopod prey. Sci Adv. 2021; 7(14):eabi5784. https://doi.org/10.1126/sciadv.abf5908 PMID: 33789903 73. Santos MB, Saavedra C, Pierce GJ. Quantifying the predation on sardine and hake by cetaceans in the Atlantic waters of the Iberian peninsula. Deep Sea Research Part II: Topical Studies in Oceanography. 2014; 106:232–244. https://doi.org/10.1016/j.dsr2.2013.09.040 74. Marc¸alo A, Nicolau L, Gime´ nez J, Ferreira M, Santos J, Arau´ jo H, et al. Feeding ecology of the common dolphin (Delphinus delphis) in Western Iberian waters: has the decline in sardine (Sardina pilchardus) affected dolphin diet? Marine Biology. 2018; 165:1–16. https://doi.org/10.1007/s00227-018-3285-3 75. De Pierrepont JF, Dubois B, Desormonts S, Santos MB, Robin JP. Stomach contents of English Chan- nel cetaceans stranded on the coast of Normandy. Journal of the Marine Biological Association of the United Kingdom. 2005; 85(6):1539–1546. https://doi.org/10.1017/S0025315405012762 76. Spitz J, Chouvelon T, Cardinaud M, Kostecki C, Lorance P. Prey preferences of adult sea bass Dicen- trarchus labrax in the northeastern Atlantic: implications for bycatch of common dolphin Delphinus del-
phis. ICES Journal of Marine Science. 2013; 70(2):452–461. https://doi.org/10.1093/icesjms/fss200 77. Monteiro PV. The purse seine fishing of sardine in Portuguese waters: a difficult compromise between fish stock sustainability and fishing effort. Reviews in Fisheries Science & Aquaculture. 2017; 25 (3):218–229. https://doi.org/10.1080/23308249.2016.1269720 78. Wise L, Silva A, Ferreira M, Silva MA, Sequeira M. Interactions between small cetaceans and the purse-seine fishery in western Portuguese waters. Scientia Marina. 2007; 71(2):405–412. https://doi. org/10.3989/scimar.2007.71n2405 79. Marc¸alo A, Katara I, Feijo´ D, Arau´jo H, Oliveira I, Santos J, et al. Quantification of interactions between the Portuguese sardine purse-seine fishery and cetaceans. ICES Journal of Marine Science. 2015; 72 (8):2438–2449. https://doi.org/10.1093/icesjms/fsv076 80. Santos MB, Pierce GJ. The diet of harbor porpoise (Phocoena phocoena) in the northeast Atlantic. Oceanography and Marine Biology. 2003; 41:355–390. 81. Me´heust E, Alfonsi E, Le Me´ nec P, Hassani S, Jung JL. DNA barcoding for the identification of soft remains of prey in the stomach contents of grey seals (Halichoerus grypus) and harbor porpoises (Pho- coena phocoena). Marine Biology Research. 2015; 11(4):385–395. https://doi.org/10.1080/17451000. 2014.943240 82. Gime´ nez J, Marc¸alo A, Ramı´rez F, Verborgh P, Gauffier P, Esteban R, et al. Diet of bottlenose dolphins (Tursiops truncatus) from the Gulf of Cadiz: Insights from stomach content and stable isotope analyses.
PLoS One. 2017; 12(9):e0184673. https://doi.org/10.1371/journal.pone.0184673 PMID: 28898268 PLOS ONE Environmental DNA as a complementary tool for biodiversity monitoring PLOS ONE | https://doi.org/10.1371/journal.pone.0300992 October 16, 2024 20 / 20