Molecular diet studies of water mites reveal prey biodiversity
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10. Sanchez MI, Coccia C, Valdecasas AG, Boyero L, Green AJ. Parasitism by water mites in native and exotic Corixidae: Are mites limiting the invasion of the water boatman Trichocorixa verticalis (Fieber, 1851)? Journal of Insect Conservation. 2015; 19(3):433–47. https://doi.org/10.1007/s10841-015-9764- 7 WOS:000356161600001. 11. Smith IM, Oliver DR. Review of parasitic associations of larval water mites (Acari, Parasitengona, Hydrachnida) with insect hosts. Canadian Entomologist. 1986; 118(5):407–72. https://doi.org/10.4039/ Ent118407-5 WOS:A1986C523900002. 12. Vasquez AAK B.A.; Ram J.L.; Miller C.J. The Biodiversity of Water Mites That Prey on and Parasitize Mosquitoes. Diversity. 2020; 12(226):6. 13. Hamback PA, Weingartner E, Dalen L, Wirta H, Roslin T. Spatial subsidies in spider diets vary with shoreline structure: Complementary evidence from molecular diet analysis and stable isotopes. Ecology and Evolution. 2016; 6(23):8431–9. https://doi.org/10.1002/ece3.2536 WOS:000392062100009. PMID: 28031795 14. Pompanon F, Deagle BE, Symondson WO, Brown DS, Jarman SN, Taberlet P. Who is eating what: diet assessment using next generation sequencing. Mol Ecol. 2012; 21(8):1931–50. Epub 2011/12/17. https://doi.org/10.1111/j.1365-294X.2011.05403.x PMID: 22171763 15. Leray M, Yang JY, Meyer CP, Mills SC, Agudelo N, Ranwez V, et al. A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents. Front Zool. 2013; 10:34. Epub 2013/06/19. https://doi.org/10.
1186/1742-9994-10-34 PMID: 23767809; PubMed Central PMCID: PMC3686579. 16. Perner J, Provaznik J, Schrenkova J, Urbanova V, Ribeiro JM, Kopacek P. RNA-seq analyses of the midgut from blood- and serum-fed Ixodes ricinus ticks. Sci Rep. 2016; 6:36695. Epub 2016/11/09. https://doi.org/10.1038/srep36695 PMID: 27824139; PubMed Central PMCID: PMC5099782. 17. Lefort M-C, Beggs JR, Glare TR, Saunders TE, Doyle EJ, Boyer S. A molecular approach to study Hymenoptera diets using wasp nests. 2020; 63. https://doi.org/10.3897/neobiota.63.58640%JNeoBiota 18. Martin P, Koester M, Schynawa L, Gergs R. First detection of prey DNA in Hygrobates fluviatilis (Hydrachnidia, Acari): a new approach for determining predator-prey relationships in water mites. Exp Appl Acarol. 2015; 67(3):373–80. https://doi.org/10.1007/s10493-015-9956-6 WOS:000362321000004. PMID: 26246189 19. Vasquez AA. Digestive composition and physiology of water mites. PhD dissertation, Wayne State Uni- versity, https://searchproquestcom/openview/cdfdde63e1641079a0c8507cd6d57980/1pdf?pq- origsite=gscholar&cbl=18750&diss=y (accessed June 30, 2018). 2017. 20. Vasquez AA, Carmona-Galindo V, Qazazi MS, Walker XN, Ram JL. Water mite assemblages reveal diverse genera, novel DNA barcodes and transitional periods of intermediate disturbance. Exp Appl Acarol. 2020; 80(4):491–507. Epub 2020/03/08. https://doi.org/10.1007/s10493-020-00476-4 PMID: 32144638. 21. Gerecke R. The water mites (Acari, Hydrachnidia) of a little disturbed forest stream in southwest Ger-
many—a study on seasonality and habitat preference, with remarks on diversity patterns in different geographical areas. Bernini F, Nannelli R, Nuzaci G, DeLillo E, editors2002. 69–89 p. 22. Schmidt HW, Muller K. Daily and annual periodicity of species Lebertia (Hydrachnellae Acari). Oikos. 1967; 18(2):357–&. https://doi.org/10.2307/3565112 WOS:A1967A474000017. 23. Hajibabaei M, Janzen DH, Burns JM, Hallwachs W, Hebert PDN. DNA barcodes distinguish species of tropical Lepidoptera. Proceedings of the National Academy of Sciences of the United States of America. 2006; 103(4):968–71. https://doi.org/10.1073/pnas.0510466103 WOS:000234938300025. PMID: 16418261 24. Rougerie R, Smith MA, Fernandez-Triana J, Lopez-Vaamonde C, Ratnasingham S, Hebert PDN. Molecular analysis of parasitoid linkages (MAPL): gut contents of adult parasitoid wasps reveal larval host. Molecular Ecology. 2011; 20(1):179–86. https://doi.org/10.1111/j.1365-294X.2010.04918.x WOS:000285396000015. PMID: 21083857 25. Folmer O, Black M, Hoeh W, Lutz RA, Vrijenhoek RC. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology. 1994; 3(5):294–9. PMID: 7881515 26. Magoc T, Salzberg S. FLASH: Fast length adjustment of short reads to improve genome assemblies. Bioinformatics. 2011; 27(21):2957–63. https://doi.org/10.1093/bioinformatics/btr507 PMID: 21903629 27. Li WZ, Godzik A. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide
sequences. Bioinformatics. 2006; 22(13):1658–9. https://doi.org/10.1093/bioinformatics/btl158 WOS:000238905700017. PMID: 16731699 28. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. Molecular Evolutionary Genetics Analysis ver- sion 6.0. Molecular Biology and Evolution. 2013; 30:2725–9. https://doi.org/10.1093/molbev/mst197 PMID: 24132122 PLOS ONE Prey DNA diversity in water mites PLOS ONE | https://doi.org/10.1371/journal.pone.0254598 July 29, 2021 17 / 18