Effects of woody forages on biodiversity and bioactivity of aerobic culturable gut bacteria of tilapia (Oreochromis niloticus)

60. Adeoye AA, Yomla R, Jaramillo-Torres A, et al. Combined effects of exogenous enzymes and probiotic on Nile tilapia (Oreochromis niloticus) growth, intestinal morphology and microbiome. Aquaculture. 2016; 463: 61–70. 61. Gunjal S, Ankola AV, Bhat K. In vitro antibacterial activity of ethanolic extract of Morus alba leaf against periodontal pathogens. Indian Journal of Dental Research. 2015; 26(5): 533. https://doi.org/10.4103/ 0970-9290.172082 PMID: 26672427 62. Glaeser SP, Dott W, Busse H-J, et al. Fictibacillus phosphorivorans gen. nov., sp. nov. and proposal to reclassify Bacillus arsenicus, Bacillus barbaricus, Bacillus macauensis, Bacillus nanhaiensis, Bacillus rigui, Bacillus solisalsi and Bacillus gelatini in the genus Fictibacillus. International journal of systematic and evolutionary microbiology. 2013; 63(8): 2934–2944. 63. Ahmad V, Khan MS. Therapeutic intervention and molecular characterizations of bacteriocin producing Lysinibacillus sp., nov., isolated from food sample. Pakistan journal of pharmaceutical sciences. 2015; 28(4). 64. Huang K, Zhang T, Jiang B, et al. Characterization of a thermostable arginase from Rummeliibacillus pycnus SK31. 001. Journal of Molecular Catalysis B: Enzymatic. 2016; 133: S68–S75. 65. Kuddus M. Bio-statistical approach for optimization of cold-active α-amylase production by novel psy- chrotolerant M. foliorum GA2 in solid state fermentation. Biocatalysis and Agricultural Biotechnology. 2014; 3(2): 175–181. 66. Krogdahl Å, Hemre GI, Mommsen T. Carbohydrates in fish nutrition: digestion and absorption in postlar-

val stages. Aquaculture nutrition. 2005; 11(2): 103–122. 67. Puspasari F, Nurachman Z, Noer AS, et al. Characteristics of raw starch degrading α-amylase from Bacillus aquimaris MKSC 6.2 associated with soft coral Sinularia sp. Starch-Sta¨rke. 2011; 63(8): 461– 467. 68. Cheng C-L, Chang J-S. Hydrolysis of lignocellulosic feedstock by novel cellulases originating from Pseudomonas sp. CL3 for fermentative hydrogen production. Bioresource Technology. 2011; 102(18): 8628–8634. https://doi.org/10.1016/j.biortech.2011.03.053 PMID: 21481585 69. Hall J, Hazlewood G, Huskisson N, et al. Conserved serine-rich sequences in xylanase and cellulase from Pseudomonas fluorescens subspecies cellulosa: internal signal sequence and unusual protein processing. Molecular microbiology. 1989; 3(9): 1211–1219. https://doi.org/10.1111/j.1365-2958.1989. tb00271.x PMID: 2507868 70. Francis G, Makkar HP, Becker K. Antinutritional factors present in plant-derived alternate fish feed ingredients and their effects in fish. Aquaculture. 2001; 199(3–4): 197–227. 71. McLeod MP, Warren RL, Hsiao WW, et al. The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proceedings of the National Academy of Sciences. 2006; 103 (42): 15582–15587. 72. Afrilasari W, Meryandini A. Effect of probiotic Bacillus megaterium PTB 1.4 on the population of intesti- nal microflora, digestive enzyme activity and the growth of catfish (Clarias sp.). HAYATI Journal of Bio- sciences. 2016; 23(4): 168–172.

73. Pattanayak S, Kumar PR, Sahoo MK, et al. First field-based evidence of association of Proteus mirabilis causing large scale mortality in Indian major carp farming. Aquaculture. 2018; 495: 435–442. 74. Han Q, Wu Z, Huang B, et al. Extraction, antioxidant and antibacterial activities of Broussonetia papyri- fera fruits polysaccharides. International journal of biological macromolecules. 2016; 92: 116–124. https://doi.org/10.1016/j.ijbiomac.2016.06.087 PMID: 27370746 75. Oluduro AO. Evaluation of antimicrobial properties and nutritional potentials of Moringa oleifera Lam. leaf in South-Western Nigeria. Malaysian Journal of Microbiology. 2012; 8(2): 59–67. 76. Nayak S. Probiotics and immunity: a fish perspective. Fish & shellfish immunology. 2010; 29(1): 2–14. 77. Desriac F, Defer D, Bourgougnon N, et al. Bacteriocin as weapons in the marine animal-associated bac- teria warfare: inventory and potential applications as an aquaculture probiotic. Marine drugs. 2010; 8 (4): 1153–1177. https://doi.org/10.3390/md8041153 PMID: 20479972 78. Lalloo R, Moonsamy G, Ramchuran S, et al. Competitive exclusion as a mode of action of a novel Bacil- lus cereus aquaculture biological agent: Competitive exclusion as a mode of action. Letters in Applied Microbiology. 2010; 50(6): 563–570. https://doi.org/10.1111/j.1472-765X.2010.02829.x PMID: 20337929 79. Thy HTT, Tri NN, Quy OM, et al. Effects of the dietary supplementation of mixed probiotic spores of Bacillus amyloliquefaciens 54A, and Bacillus pumilus 47B on growth, innate immunity and stress

responses of striped catfish (Pangasianodon hypophthalmus). Fish & shellfish immunology. 2017; 60: 391–399. PLOS ONE Effects of wood forages on gut bacterial biodiversity and bioactivity in tilapia PLOS ONE | https://doi.org/10.1371/journal.pone.0235560 July 2, 2020 17 / 17