Dataset search in biodiversity research: Do metadata in data repositories reflect scholarly information needs?
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term to be not relevant or too complicated and fuzzy, omission was also permitted. We counted all artifacts that did not get any rating with the category NONE. As we wanted to obtain intuitive feedback, the experts were told not to spend too much time on the classification decision but to determine categories according to their knowledge and research perspective. For each question, annotators had the opportunity to provide a comment. We decided to use a combination of csv files, Python scripts and Limesurvey to support the annotation process. Details on this process can be found in the supplementary material in our repository. Results and metrics We analyzed the user responses to determine whether the identified information categories are comprehensive and representative for biodiversity research. We computed the inter-rater agreement per artifact to determine the category that best describes an artifact. Representativeness of the categories. In order to verify completeness we determined the fraction of artifacts assigned to the category OTHER, i.e., if the experts deemed none of the given categories as appropriate. Fig 2 depicts the frequency of information categories and how often they were selected by the domain experts. As it turned out, the category OTHER was selected by at least 1 expert per artifact for 46% of the phrases and terms and by at least 2 experts for 24%. The fraction of phrases for which at least 3 experts selected the category Fig 2. The frequency of the categories and how often they were assigned to given phrases and terms, with and
without QUALITY correction. https://doi.org/10.1371/journal.pone.0246099.g002 PLOS ONE Dataset search in biodiversity research PLOS ONE | https://doi.org/10.1371/journal.pone.0246099 March 24, 2021 11 / 36