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The ecological and biodiversity conservation values of farm dams: A systematic review

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RESEARCH ARTICLE The ecological and biodiversity conservation values of farm dams: A systematic review Michelle LittlefairID1*, Ben C. Scheele1, Martin Westgate1,2, David Lindenmayer1 1 Sustainable Farms, Fenner School of Environment & Society, The Australian National University, Acton, Australian Capital Territory, Australia, 2 Atlas of Living Australia, Commonwealth Scientific and Industrial Research Organisation, Black Mountain, Canberra, Australian Capital Territory, Australia * michelle.littlefair@anu.edu.au Abstract Biodiversity is in rapid decline globally with agriculture being one of the leading causes. Within agricultural landscapes, some features provide a benefit to biodiversity that is dispro- portionate to their spatial area. An interesting example is artificial ponds–or farm dams– which can support a large variety of taxa. Here, we present a global review of farm dam research related to biodiversity conservation objectives to provide an overview of the topics, key research insights, and the characteristics of current research. We used a three-stage process to screen literature and identified 104 relevant papers across 27 countries encom- passing studies of 13 different taxa. Most of the studies were short-term (less than 5 years) with small sample sizes (less than 20 sites). Of the 104 papers, 88 were focussed primarily on ecological outcomes, such as species richness or abundance, and 15 on primary produc- tion outcomes, such as crop and livestock yield, despite addressing or measuring ecological

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metrics. Only one study measured both ecological and primary production outcomes. Stud- ies frequently examined how the features of dams (79 studies) and attributes of the sur- rounding landscape (47 studies) impact particular species and communities. Terrestrial mammals (1 study) were under-represented in the literature with macrophytes (28 studies), macroinvertebrates (26 studies), and amphibians (19 studies) receiving the most attention. Our results reveal a growing trend towards recognizing farm dams as habitats for various taxa, including amphibians, beetles, dragonflies, and other macroinvertebrates within agri- cultural environments. Significant knowledge gaps exist in understanding how dam age, invasive species, and effective management practices impact the biodiversity conservation values of farm dams. Future research should emphasize enhancing biodiversity by collabo- rating with landholders to increase habitat through strategic vegetation planning, minimizing runoff and nutrient inflow, and restricting stock access. 1. Introduction Major declines in biodiversity are occurring across the globe [1,2] as a result of the intensifica- tion of agriculture [3,4], land clearing [3], use of chemicals [5], and the rise in invasive species adapted to modified landscapes [6]. These factors have resulted in substantial declines in groups such as amphibians [7], birds [8] and invertebrates [9]. The persistence of biodiversity PLOS ONE PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 1 / 18 a1111111111 a1111111111 a1111111111 a1111111111 a1111111111

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OPEN ACCESS Citation: Littlefair M, Scheele BC, Westgate M, Lindenmayer D (2024) The ecological and biodiversity conservation values of farm dams: A systematic review. PLoS ONE 19(5): e0303504. https://doi.org/10.1371/journal.pone.0303504 Editor: Petr Heneberg, Charles University, CZECH REPUBLIC Received: September 25, 2023 Accepted: April 25, 2024 Published: May 13, 2024 Copyright: © 2024 Littlefair et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Data Availability Statement: The detailed data cannot be shared within the manuscript due to its vast size. However, the data and articles analyzed are available in supporting information (Appendix 2). Data breakdowns and codes are accessible from Michelle Littlefair (contact via michelle. littlefair@anu.edu.au) for researchers who meet the criteria for accessing confidential data. Funding: The author(s) received no specific funding for this work. Competing interests: The authors have declared that no competing interests exist.

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in agricultural landscapes is often associated with the presence of features such as farm dams, shelterbelts, rocky outcrops, and large old paddock trees [10–12]. These elements, though fre- quently of artificial origin, can contribute to biodiversity enhancement in the landscape by offering habitat, promoting heterogeneous landscape structuring, and providing shelter [11]. Farm dams (sometimes also termed ‘ponds’) can serve as valuable assets for biodiversity in many agricultural landscapes [13–16]. We use the term “farm dams” hereafter to distinguish these smaller agricultural reservoirs (~102–105 m2) [17] from large-scale irrigation storages and the larger human-made structures used for flood control and/or hydroelectricity. Farm dams often constitute the only wetlands in heavily modified landscapes where natural water bodies have been drained, in-filled and disappeared [17]. Hence, these artificial systems pres- ent an opportunity to partly conserve and enhance biodiversity while also contributing to agri- cultural production [17–20]. While natural wetlands have diminished significantly in number, up to 51% since 1970 in many parts of the world [1], farm dams are abundant with a consider- able number of new farm dams being constructed each year [21–23]. For example, there was a 2% per annum increase in the number of farm dams in Australia between 1988 and 2000 and, as of 2019, the continent supported ~ 1.765 million farm dams [17]. In the United Kingdom, approximately 2000 farm dams are created each year [24,25] with the numbers increasing

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from 425,000 in 1998 to 478,000 in 2007 [24]. The importance of farm dams for conservation is underscored by their capacity to offer distinctive habitat for various taxa. For instance, farm dams support waterbirds through diet provision, enhance the habitat for aquatic macroinver- tebrates, and provide breeding habitat for amphibians [26–28]. Recognizing the links between aquatic and terrestrial ecosystems, farm dams have the potential to positively influence not only alpha diversity but also contribute to beta and gamma diversity, further emphasizing their contribution to biodiversity conservation. The characteristics of farm dams and how they are managed may have important impacts on their value for biodiversity [10,24], with regionally varying benefits [17]. An understand- ing of the cultural, social, and economic significance of dams in different regions is impor- tant to understand the motivation behind, and application of, management practices and help guide conservation plans and outcomes. For example, it is common for dams in North America to be stocked with large numbers of fish for recreational fishing purposes, and for dams in Australia to be used as the primary water source for livestock and irrigation, much like their European counterparts [29,30]. Additionally, in countries with developing agricul- ture, such as South Africa, farm dams are relied upon as a dependable water source during periods of drought or water scarcity [31]. In each case, these dual purpose/usages could neg-

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atively impact biodiversity values. Furthermore, while farm dam configuration varies, they are often designed and constructed to have steep banks and deep basins which promote water retention [17,32] and make it harder for cattle to become bogged in muddy areas [16,32]. Whilst farm dams constructed in this manner provide a reliable source of water for stock and irrigation [21,33,34], they lack shallow edges and littoral zones with vegetation, both characteristics of many natural water bodies [35]. Littoral zones are particularly impor- tant for biodiversity as the vegetation provides habitat for foraging, refuge, and egg-laying for organisms such as amphibians, fish, and macroinvertebrates [16,36]. Gentler slopes along the edges of artificial farm dams serve to mitigate the risk of these environments becoming ecological traps, where animals entering the dam are at risk of being unable to exit [37]. Despite being recognized as important for biodiversity, there are still key knowledge gaps about the ecological value of farm dams in agricultural areas. These gaps may limit the devel- opment of effective policies, programs, and practical management prescriptions to improve the conservation value of these small water bodies. To date, there has been no global review PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 2 / 18

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of the state of the scientific literature focussed specifically on the use of farm dams and the relationships between their structure, condition, management, and their value for biodiver- sity conservation. The development of an effective conservation strategy for human-made habitats requires the examination of appropriate sampling methodologies, study duration and size, taxonomic group coverage, publication year and the country in which the study was conducted. Studies with longer durations can provide insight into the effects of ecologi- cal dynamics over time while a larger sample size may provide more statistically robust results [38,39]. The inclusion of a wide range of taxonomic groups in a study allows for a more comprehensive understanding of ecological dynamics [39]. Publication year is a potential indicator of the most recent developments in the field and whether the research takes those into account [40]. Knowledge about the country where the study was conducted can illuminate the framework of local culture, social, economic and political factors which may influence the local conservation strategies. It is important to consider these factors to develop more informed and effective conservation strategies to address the challenges facing conservation in human-made habitats. This study aims to critically examine research on farm dams to identify themes that may assist in the development of policies and programs in support of biodiversity. In conducting this review, our goals were to: quantify the literature investigating biodiversity in farm dams,

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highlight the major knowledge gaps in biodiversity in farm dams, and identify possible ave- nues to overcome these gaps. We asked the following questions to guide our review: 1. What are the characteristics of conservation-focused research on farm dams (e.g., sample size, study duration, taxonomic group coverage, publication year, and country of study)? 2. Which taxonomic groups are studied, and which biodiversity metrics are used to quantify these groups at farm dams? 3. What are the ecological variables used to predict the biodiversity values of farm dams (e.g., vegetation cover, and water quality)? 2. Methods 2.1 Multi-stage process–empirical review Adhering to PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines, we conducted a systematic review of the farm dam literature using a three-stage process (Fig 1). The first stage involved using the databases “Clarivate Web of Science” and “Scopus” to search for peer-reviewed publications that measured ecological variables on farm dams. In each database, we adapted the search to account for syntax differences and include any words shown in Table 1 representing a farm-related context (e.g., TITLE-ABS-KEY- WORD (farm* OR agriculture*) with the words shown in Table 1 representing a waterbody (e.g., TITLE-ABS-KEY (dam* OR pond* OR tank*). The two search engines grouped the arti- cles into research areas, enabling us to exclude articles from fields which were not relevant for the purpose of our study, such as aquaculture and hydropower. Studies with an ecological

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objective that addressed agricultural production, water quality, vegetation or biodiversity were retained. The search was run on September 19th, 2023, and identified a total of 7,995 papers that met our search criteria. For the second stage of the review, two independent researchers, distinct from the team of co-authors, alongside the author, screened the titles and abstracts of 7,995 articles with the R statistical language program “revtools” [41], identifying articles focused on biodiversity objec- tives in farm dams (Table 2). PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 3 / 18

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To be included in the subsequent review, each article had to meet the following criteria: 1. Include any of the words shown in Table 1 representing a farm-related context e.g., ‘farm’ or ‘agriculture’ followed directly by any of the words shown in Table 1 representing a water- body e.g., ‘dam’, ‘tank’, ‘reservoir’, ‘pond’, in the title, keywords or abstract. 2. Include an objective focusing on biodiversity outcomes by using words related with ecology or biodiversity, in the title, keywords or abstract (Table 2). Fig 1. Selection process of included publications from the Clarivate Web of Science and SCOPUS. https://doi.org/10.1371/journal.pone.0303504.g001 PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 4 / 18

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We excluded grey literature, laboratory studies and all studies pertaining to hydropower dams, industrial waste dams, constructed wetlands and levee, resulting in 250 articles remain- ing for review. A full text review was conducted for the previously selected 250 articles to identify those with biodiversity objectives and/or outcomes, and centred around our definition of farm dams, being small (~102–105 m2), typically human-made reservoirs used as a water source for crops, livestock, and other agricultural purposes. Studies that did not have or measure a biodi- versity relevant outcome, goal or aim were removed (e.g., studies that looked at farm dams as a source of water for human consumption or measured greenhouse gas emissions). This pro- duced 104 articles that fit our selection criteria (S2 Appendix). To identify research patterns Table 1. Included and excluded terms for searching farm dam articles, categorized into farm-related and water- body-related terms. Included and excluded search terms for further assessment of farm dam articles Farm-related Waterbody-related Excluded terms agricultur* agro-*, arable, farm*, non-urban artificial, cattle ponds, dam* earth bank, earth tank, excavated tank, human-made, human-modified manmade, man-made, pond* reservoir*, waterbod*, water storage, wetland* arch dam, beaver dam, buttress dam, coffer dam, constructed wetland, diversion dam, embankment dam, gravity dam, hydropower dam, industrial waste dam, levee, masonry dam, overflow dam, regulating dam, saddle dam or dike The search was adapted to account for syntax differences

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(*) and quotation marks were used for phrase searching. Terms applied to titles, abstracts, or keywords. https://doi.org/10.1371/journal.pone.0303504.t001 Table 2. The included terms used in part 2 of the screening process to search for appropriate farm dam articles. Included search terms for the second stage of the assessment of farm dam articles abund*, availability, characteristic*, connect* distribut*, ecology*, fauna, habitat*, landscape, occup* organism, presence, reproduce*, selection, use activit*, biodivers*, communit*, conserve*, divers* endanger*, flora, hotspot, life, occur*, population, quality, restore*, species, vulnerable assemblage, biology* compos*, detect*, eco-, ecosystem, environment*, function, invasive, manag*, organic, predator*, rar*, rich*, threaten*, wild* The search was adapted to account for syntax differences (*) and included prefixes and suffixes e.g., “meta-population” and “populations”, and compound words e.g., “wildlife”. Terms applied to titles and abstracts. https://doi.org/10.1371/journal.pone.0303504.t002 PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 5 / 18

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within the literature, we extracted the following information from 104 papers: 1) the year of publication, the duration of the study, and the precise location (latitude/longitude or region), (2) the number of farm dams in the study and the target taxon (if any), and (3) the defined research goals or objectives. To ensure meaningful conclusions, this review focused only on research which fulfilled the aforementioned criteria. 2.1.1 Bias assessment. We performed a comprehensive bias assessment focusing on eco- logical fallacy, confounding variables, data validity and reliability, temporal issues, and geo- graphical boundary generalizations. The goal of this assessment was to critically assess the potential sources of bias and limitations across the 104 papers selected for inclusion. Each of the included papers underwent a thorough bias assessment using the standardised scoring sys- tem provided by the Cochrane Collaboration’s Risk of Bias Tool [42]. This resulted in each study being assigned an overall result ranging from low to high. Notably, for a paper to receive a "high" overall ranking, it is judged to be at high risk of bias in at least one domain, or there may be concerns across multiple domains that substantially lowers confidence in the result. 2.2 Research questions 2.2.1 What are the characteristics of conservation-focused research on farm dams (e.g., sample size, study duration, taxonomic group coverage, publication year, and country of study)?. We used data collected during the third stage of the review to identify trends in the

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farm dam literature. We created five categories (“Study Type”, “Taxon”, “Predictor Variable”, “Response Variable”, and “Location”). For example, the category “Study Type” was broken into groups such as “Observational”, “Interventional”, “Long-term”, “Short-term”, and each article was accordingly assigned one or more of these labels (S1 Appendix). Predictor and response variable categories were comprised of a combination of similar variables measured in each paper e.g., the “Dam characteristics” category included variables related to dam configu- ration such as “Construction design”, “Construction year” and, “Surface area”. We used the R package ggplot2 [43] to create a heatmap of the data, i.e., a matrix where each entry shows a colour corresponding to the prevalence of articles in a given category. Each heatmap was then used to visualise variation across multiple combinations of two of the data categories [Study Type, Response Variable, Predictor Variable, Taxon] to display patterns of associations. All 104 articles were evaluated for: 1) duration of study, 2) number of waterbodies, 3) tar- geted taxonomic groups, and 4) the nature of the sampling methodology, distinguishing between observational and interventional methods. For the examination of global farm dam research over time, survey dates and region were extracted for each study at the level of detail provided by the study and then categorized into year, country, and continent. 2.2.2 Which taxonomic groups are studied and which biodiversity metrics are used to

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quantify these groups at farm dams?. We conducted a detailed evaluation of farm dam papers with biodiversity objectives (n = 104) to identify variables influencing patterns of biodi- versity. We read each paper and recorded the ecological response variables measured, for example species richness. Biodiversity can be classified and measured in several ways depend- ing on the landscape, ecosystem, or habitat subject to evaluation [44–47]. We identified and recorded the taxonomic groups and biota examined in each article, encompassing a range from amphibians, birds, and macroinvertebrates to include invasive and predatory species such as fish and crayfish. Articles that focused on more than one group were recorded across all relevant taxa. We also identified and recorded the “biodiversity metric” (e.g., species rich- ness, abundance, and occurrence) used to measure the biota studied. Heatmaps were produced to visualise patterns of association between the groups of biota that articles examined, and the biodiversity metrics used to quantify those groups. PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 6 / 18

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2.2.3 What are the ecological variables used to predict the biodiversity values of farm dams (e.g., vegetation cover, and water quality)?. Studies assessing farm dams’ biodiversity success were categorized based on their objectives. Studies that included production objectives, along with biodiversity objectives, or examined production objectives in response to biodiver- sity relevant variables were included. We focused on three target groups: fauna, vegetation, and water quality. This component of our review was descriptive as there were too few samples in each class to make quantitative comparisons. Heatmaps were produced to visualise patterns of association between these variables and the objective of interest. Our approach is a standard method to summarize scientific information where inconsistent objectives and definitions are used, and data are too sparse to allow formal meta-analysis [48]. 3. Results We identified 104 relevant articles that examined the biodiversity values of farm dams. The articles came from 66 different publication outlets, with all but two being published in peer- reviewed journals, the remaining studies were theses. Studies were conducted across 27 coun- tries, with the most commonly represented countries being Spain (10%), The United States of America (9%), Japan (6%), Australia (5%), and South Korea (5%). We found there has been an increase in the number of studies examining biodiversity in farm dams since 1950 with at least one study per year from 2003. Since 2003, the number of arti-

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cles published annually has fluctuated between eleven (11) in 2019 and one (1) in 2016 (Fig 2). 3.1 Risk of bias assessment Our risk of bias assessment revealed considerable variation amongst the 104 articles (see S3 Appendix). Studies with an overall ranking of “low” (i.e., low risk for all assessment criteria) made up 23% of the studies, and studies with an overall ranking of “some concern” (i.e., some concern was noted for only one assessment criteria) made up 24%. We found 32% of studies raised some concern in at least two of the assessment criteria, and 20% of studies had a high risk of bias in at least one assessment criteria. This resulted in 53% of studies with an overall ranking of “high” (Fig 3). This commonly resulted from a lack of sufficient detail to rule out the concern for the risk of bias. No studies had a critical risk of bias. 3.2 What are the characteristics of conservation-focused research on farm dams (e.g., sample size, study duration, taxonomic group coverage, publication year and country of study)? The duration of the studies in 97 of the 104 articles ranged from one day up to five years, with the remaining seven articles fitting our definition of long term, exceeding five years or more. The average farm dam study occurred over approximately 18 months. Sample size (number of water- bodies) ranged from two dams to 16,543 dams with a median sample size of 40 and a mean of 345. Ninety-eight studies utilized a sampling methodology that was observational where

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researchers undertook their investigation without manipulation of the study area or subject, with the remaining six studies using interventions such as building fences around the dams. Many of the articles had research objectives, aims and goals that were exclusively ecolog- ically and/or biodiversity motivated, commonly answering questions that sought to improve the biodiversity in or around farm dams (n = 75). The remaining studies (n = 29) posed ques- tions that examined agricultural production in response to biodiversity-relevant variables hereafter referred to as production-based studies. Only one study of the 104 examined had aims and goals that addressed both ecological and agricultural outcomes. PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 7 / 18

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Fig 3. Representative summary of risk of bias across the studies. The leftmost colour, indicated by green, represents a low risk of bias. In the middle, represented by yellow, indicates an unknown risk of bias. Lastly, the rightmost colour, depicted as red, suggests a potentially high risk of bias. https://doi.org/10.1371/journal.pone.0303504.g003 Fig 2. Paired bar and pie charts. The bar chart depicts the number of articles and the number of countries in which these articles were published, sorted by year. The pie chart depicts the total number of published articles, with the count represented in brackets, to increase readability. https://doi.org/10.1371/journal.pone.0303504.g002 PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 8 / 18

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3.3 Which taxonomic groups are studied and which biodiversity metrics are used to quantify these groups at farm dams? Of the three target groups that we investigated (fauna, vegetation, and water quality), fauna was the most examined (n = 64) followed by vegetation (n = 32), and water quality (n = 22). Most articles focused on only one of the three categories, while eight described both vegetation and fauna, five described water quality and fauna, two described both vegetation and water quality, and another two described all three of the categories. Macroinvertebrates were the most commonly (n = 28) studied taxonomic group, followed by macrophytes (n = 26) and amphibians (n = 18). Many of the studies used different metrics as proxies to measure biodi- versity, with the most common measure being species richness (n = 35) followed by species abundance (n = 18). Species richness was most commonly measured as a response to the phys- ical characteristics of dams (n = 72) and the physical characteristics of the landscape surround- ing the dams (n = 43). Of the studies measuring species richness, 18 focused on macroinvertebrates and 13 focused on macrophytes (Fig 4). 3.4 What are the ecological variables used to predict the biodiversity values of farm dams (e.g., vegetation cover, and water quality)? In many of the selected studies, authors considered physical characteristics of dams, such as surface area and vegetation cover, as response variables. Out of those investigations, 48 looked at dam size while 30 explored dam depth, and 26 examined vegetation cover. Further, 24 of the

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aforementioned studies focused on macroinvertebrates, 18 on macrophytes, and 16 on amphibians (Fig 5). Vegetation, of great importance in regard to habitat provision and sediment filtration, con- tributed to the biodiversity value in 14 studies, with the presence and cover of vegetation at Fig 4. Heatmap showing the taxon studied in each article and the response variable used. The darker colours represent a higher number of articles. Each paper may be represented in more than one category. Category definitions can be found in S1 Appendix. https://doi.org/10.1371/journal.pone.0303504.g004 PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 9 / 18

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dams commonly being studied in conjunction with water birds, (4), amphibians (4), macroin- vertebrates (3), and water quality (2). Six ecological studies explored the influence of water quality on the biodiversity value as well as the factors affecting water quality in farm dams. Eight studies found surrounding land use had the biggest influence on water quality with cattle and chemical run off decreasing water quality. Three studies found the characteristics of the surrounding landscape influenced water quality. Two of these studies showed that the presence of surrounding, fringing and sub- merged macrophytes improved water quality while the other study found the presence of over- hanging woody vegetation (i.e., shade trees and shrubs) and an increased influx of sediment from the surrounding paddocks decreased water quality. Of the 29 studies with objectives that included production outcomes, 14 examined water quality, with eight finding intensive land use, such as grazing and cropping, had a negative effect on the water quality of dams. Four found the presence of vegetation in dams improved water quality. Two studies looked at water quality as a predictor of biodiversity and found that dams with a higher quality of water (i.e., less heavy metals, nitrogen and phosphorus) were positively correlated with an increase in macrophyte species richness. 4. Discussion We reviewed 104 articles examining biodiversity values of farm dams. Our systematic review highlighted the attention given by researchers to the study of farm dams as potential habitats

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Fig 5. Heatmap showing the taxon studied and the predictor variable used. The darker colours represent a higher number of articles. Each paper may be represented in more than one category. Category definitions can be found in S1 Appendix. https://doi.org/10.1371/journal.pone.0303504.g005 PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 10 / 18

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for various aquatic species. Additionally, our findings indicate a notable focus among research- ers on exploring the impact of physical characteristics and management practices of dams on biodiversity. We found species richness and abundance to be among the frequently used response variables across ecological studies, with water quality and vegetation being com- monly used predictor variables. Our risk of bias assessment also revealed a noteworthy propor- tion of studies exhibiting a "high" risk of bias. This highlights the need for improved methodological rigor and transparency in future research to ensure reliable evidence for effec- tive conservation strategies.Ecological studies vary in length depending on the research ques- tion, the study design and the duration of the ecological phenomena being studied. This has resulted in a body of literature ranging from a few days to many decades. Most of the studies within our review collected data over periods of less than two years. These short-term studies are important for providing snapshot results; however, long-term studies provide valuable insights into the dynamics and processes of ecosystems over extended periods of time, identi- fying patterns, trends, and fluctuations that may not be apparent in short term studies to be identified [49]. More funding for long-term ecological studies is required to sustain long-term data collection, equipment, and personnel costs, provide access to new advances in technology, prepare for unforeseen disruptions and leverage the importance of long-term data in conserva-

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tion and management decisions [50]. We identified trends in the geographic and temporal distribution of research on farm dams. For example, there is a growing focus on understanding the ecological and conservation implications of farm dams, with the number of studies on the biodiversity values of farm dams increasing significantly in recent years. However, the location of studies revealed that most research has been conducted in more affluent regions, such as Europe (n = 45), potentially resulting in a biased understanding of the global ecological importance of farm dams. Further- more, the research highlights unique regional conservation and management challenges, such as the presence of non-native species [51], construction configuration and different hydrologi- cal regimes [52]. This information can not only highlight regions that require additional research efforts but identify opportunities for collaboration between conservation research groups in these different regions. Integration of production and biodiversity conservation is increasingly recommended as a management approach to improve the sustainability of agricultural systems [53]. However, we found only a small number of studies examined how agricultural outcomes (e.g., livestock use) were influenced by the physical characteristics of dams, such as the influence of vegetation cover on water quality. Furthermore, only one article, a review [54], considered both conserva- tion and production outcomes. The limited number of studies considering both biodiversity

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and production values of farm dams highlights the need for more research across disciplines and the need to engage landholders to co-design and test interventions that enhance both pro- duction and biodiversity values. One way to address this shortcoming could be to prioritize funding schemes that emphasize collaboration between ecological and agricultural researchers as well as landholders and managers. Ecological research on farm dams has predominantly focused on the physical characteris- tics of dams and the surrounding landscape. Vegetation and water quality can be relatively eas- ily measured, manipulated, and recorded and are widely known to contribute to biodiversity. Larger dam size and higher vegetation cover and complexity are important predictors of biodi- versity, while water quality is crucial for both biodiversity and production outcomes [55]. However, highly vegetated dams are sometimes perceived as a hindrance to agricultural pro- duction [16] and improving water quality can involve trade-offs such as increased labour and potential water loss from evaporation through changes in the chemical composition and sur- face tension of water [56,57]. PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 11 / 18

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While the physical characteristics of farm dams are important predictors of biodiversity, it is also essential to consider the ecological needs and preferences of different taxa. Much of the research focused on macroinvertebrates, macrophytes, and amphibians [58,59] with some popu- lations now heavily reliant on farm dams for their persistence [13,60], while studies focusing on mammals were completely absent. This focus could be because farm dams may not be important habitats for many mammal species, and natural habitats, such as wetlands, may be more suitable [51]. Additionally, many of the focal taxa (e.g., amphibians and reptiles), have very specific habi- tat requirements, are small and have limited dispersal capacity. Therefore, a more holistic approach that considers both the physical characteristics of farm dams and the ecological needs of different taxa is necessary for effective management and conservation of farm dams. 4.1. What is the role of farm dams in conservation? Our systematic review highlighted a prevalent focus on conservation within the research examined. Newer trends in farm dam research suggest a notable transition towards a conserva- tion-centric approach. Studies are increasingly focusing on the role of farm dams in habitat connectivity between naturally occurring waterbodies, the migration of animals across farm- land, and reducing the risk of local extinction [12,15,16]. Many articles identified strong rela- tionships between variables such as surface area, vegetation cover and water quality and the

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occurrence of one or more taxonomic groups, suggesting management strategies can be imple- mented to improve habitat value and thus biodiversity, especially when management is done in conjunction with effective conservation of existing wetlands [61]. Several studies [62,63] found that some species (e.g., waterbirds in Spain [27] may choose dams as a permanent source of water and habitat, over waterbodies with fluctuating hydroperiods, such as wetlands, especially during long hot and/or dry periods [63–65]. However, the increase in exotic and predatory species in dams with permanent water poses a challenge to biodiversity [65]. Further research on effective management strategies is essential, laying the foundation for a compre- hensive exploration of farm dam management in support of biodiversity conservation. The biodiversity values of farm dams are dependent on how dams are managed. However, most farm dams are constructed and maintained for economic purposes rather than for con- servation or aesthetics [13]. Older dams that are constructed to be deep and steep-sided go through succession, changing these attributes over time creating shallows with littoral zones that can act as habitat for numerous organisms. However periodic dredging, a common man- agement practice in older dams, returns the dams to their original state [57], greatly reducing the habitat value of these waterbodies [66]. Recent work by Westgate et al. [65] has shown that management practices such as fencing farms dams to limit direct livestock access increases

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aquatic and riparian vegetation cover, which is likely to have flow-on benefits for biodiversity conservation. Simple steps such as increasing habitat complexity and heterogeneity within dams, and limiting disturbance, have all been identified as important for farm dam ecosystems [67]. Buffers between dams and farmed areas, such as vegetation strips [68], hedges [69], and riparian strips [70] can help mitigate agricultural impacts on dams, by filtering pollutants, pro- viding corridors between habitats, and reducing stock access. Additionally, buffers can be designed to direct ecosystem services from farm dams to agricultural lands, such as filtering water runoff to improve soil fertility and providing habitat for pollinators to enhance crop pro- ductivity. There has also been success in countries such as Australia [71] and New Zealand [72], with programs that reward landholders for making biodiversity friendly farming deci- sions such as the ones described above. These programs could be tailored specifically for farm dams. Such programs may lead to partnerships among multiple stakeholders in agroecosys- tems–farmers, government, practitioners, scientists, NGOs, and the wider population [72]. PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 12 / 18

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Our results show that farm dams can have a positive influence on biodiversity in landscapes where loss and degradation of natural waterbodies has occurred. However, there are limits to the biodiversity value of farm dams [73,74], and their establishment must consider their con- tribution to biodiversity holistically, taking into account the wider landscape, including the potential impact on or loss of very small wetlands, hydrological regimes, migration patterns [26], and the spread of pests and disease [72]. It is imperative to recognize that while farm dams can potentially provide habitat for biodiversity, their creation and primary purpose is typically for agricultural use rather than biodiversity enhancement and the preservation of nat- ural wetlands should take precedence over the construction of farm dams. The biodiversity values associated with farm dams often emerge as by-products of their construction and man- agement practices. Nevertheless, a farm dam that is well managed in conjunction with effec- tively conserved natural waterbodies can be an important contribution to the biodiversity of a landscape [61]. 4.2. Key knowledge gaps While research on the biodiversity value of farm dams has increased, significant knowledge gaps persist. Despite extensive study on the impact of agricultural intensification on farmland biodiversity, little attention has been given to its potential effects on dams in agricultural land- scapes. We anticipate that intensified land use in farm dam catchments may lead to reduced

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species richness and habitat quality [75]. Furthermore, the significance of farm dams in sup- porting biodiversity may be more pronounced in areas with limited alternative habitats and prevalent land use intensification [76–78]. However, detailed comparisons between farm dams and natural wetlands are scarce, comprising less than 10% of the literature. Additionally, research on managing dams alongside natural wetland conservation is limited. We recom- mend that future research on farm dams focuses on: (1) quantifying how the physical charac- teristics of farm dams (e.g., size) influence variables such as species richness, (2) understanding how land use intensity in farm dam catchments influences variables such as water quality, and (3) experimentally quantifying the impact of management practices on the biodiversity values of farm dams. As farm dams are ubiquitous in many agricultural land- scapes, better understanding of their biodiversity values and how these can be enhanced by management could lead to improved conservation outcomes across large areas. Supporting information S1 Checklist. PRISMA 2009 checklist. (DOC) S1 Appendix. Appendix 1. Categories and the corresponding variables and definitions from each study. (TIFF) S2 Appendix. Appendix 2. Complete list of the 102 articles included in this review. Including article name, year of publication, authors and journal of publication. (TIFF) S3 Appendix. Appendix 3. Representative summary table for the risk of bias assessment.

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Green cells with (plus) indicate a low risk of bias; yellow cells with (question mark) indicate an unknown risk of bias; red cells with (hyphen) indicate a high risk of bias. (DOCX) PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 13 / 18

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Acknowledgments We thank Colleen O’Malley and Angelina Siegrist for support in the initial screening stage of this review, John Evans for assistance with the figures, and Sustainable Farms for the support for the work reported here. Author Contributions Conceptualization: Ben C. Scheele, Martin Westgate, David Lindenmayer. Data curation: Michelle Littlefair. Formal analysis: Michelle Littlefair. Funding acquisition: David Lindenmayer. Investigation: Michelle Littlefair. Methodology: Michelle Littlefair, Martin Westgate. Project administration: Martin Westgate, David Lindenmayer. Resources: Martin Westgate, David Lindenmayer. Software: Michelle Littlefair. Supervision: Ben C. Scheele, Martin Westgate, David Lindenmayer. Validation: Michelle Littlefair, Ben C. Scheele, David Lindenmayer. Visualization: Michelle Littlefair. Writing – original draft: Michelle Littlefair. Writing – review & editing: Michelle Littlefair, Ben C. Scheele, David Lindenmayer. References 1. IPBES. (2019). Global assessment report on biodiversity and ecosystem services. Bonn, Germany: IPBES secretariat. 2. WWF. (2020). Living Planet Report 2020—Bending the curve of biodiversity loss. Gland, Switzerland: WWF International. 3. Dudley N., & Alexander S. (2017). Nature-based solutions for building resilience in agricultural land- scapes. World Development, 98, 381–399. https://doi.org/10.1016/j.worlddev.2017.04.028 4. Rudel T. K., Defries R., Asner G. P., & Laurance W. F. (2009). Changing drivers of deforestation and

Trang 14 · Đoạn 34Vị trí nguồn

new opportunities for conservation. Conservation Biology, 23(6), 1396–1405. https://doi.org/10.1111/j. 1523-1739.2009.01332.x PMID: 20078640 5. Chagnon M., Gingras J., Turmel M.-C., & Arodz M. (2015). Environmental risk assessment of pesticide use in lowbush blueberry fields in Que´bec, Canada. Environmental Monitoring and Assessment, 187 (3), 1–17. https://doi.org/10.1007/s10661-015-4444-4 6. Atobe T., Osada Y., Takeda T., Kuroe M., & Miyashita T. (2014). Use of exotic grasslands by amphibi- ans and reptiles in central Japan. Journal of Herpetology, 48(3), 315–322. https://doi.org/10.1670/12- 118 7. Dehling J. M., & Dehling D. M. (2021). The global decline of amphibians: A population-level examination of causes and threats. Biodiversity and Conservation, 30(2), 581–605. https://doi.org/10.1007/s10531- 020-02089-4 8. Gregory R. D., Skorpilova J., Vorisek P., & Butler S. J. (2019). A century of population declines in Euro- pean birds. Avian Conservation and Ecology, 14(1), 12. https://doi.org/10.5751/ACE-01401-140112 9. Billaud J.-P., Vermeersch X., & Porcher E. (2021). The decline of biodiversity in freshwater systems: Patterns, drivers and responses. Freshwater Biology, 66(2), 319–347. https://doi.org/10.1111/fwb. 13633 PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 14 / 18

Trang 15 · Đoạn 35Vị trí nguồn

10. Lecq S, Loisel A, Brischoux F, Mullin SJ, Bonnet X. Importance of ground refuges for the biodiversity in agricultural hedgerows. Ecol Indic. 2017; 72:615–626. https://doi.org/10.1016/j.ecolind.2016.08.032 11. Lindenmayer DB, Macbeth SM, Smith DG, Young ML. Natural Asset Farming: Creating Productive and Biodiverse Farms. CSIRO PUBLISHING; 2022. 12. Pustkowiak S, Kwieciński Z, Lenda M, Michał Żmihorski, Rosin ZM, Piotr Tryjanowski, Piotr Sko´rka (2021) Small things are important: the value of singular point elements for birds in agricultural land- scapes. Biological Reviews 96:1386–1403. https://doi.org/10.1111/brv.12707 PMID: 33694303 13. Brainwood M, Burgin S. Hotspots of biodiversity or homogeneous landscapes? Farm dams as biodiver- sity reserves in Australia. Biodivers Conserv. 2009; 18(11):3043–3052. https://doi.org/10.1007/s10531- 009-9623-5 14. Hazell D, Cunningham R, Lindenmayer DB, Mackey B, Osborne W. Use of farm dams as frog habitat in an Australian agricultural landscape: Factors affecting species richness and distribution. Biological Con- servation. 2001; 102(2):155–69. 15. Simaika JP, Samways MJ, Frenzel PP. Artificial ponds increase local dragonfly diversity in a global bio- diversity hotspot. Biodiversity and Conservation. 2016; 25(10):1921–1935. https://doi.org/10.1007/ s10531-016-1168-9 16. Swartz D. R., & Miller D. A. (2019). Managing farm ponds as breeding sites for amphibians: key trade- offs in agricultural function and habitat conservation. Ecological Applications, 29. https://doi.org/10. 1002/eap.1964 PMID: 31243830

Trang 15 · Đoạn 36Vị trí nguồn

17. Malerba ME, Wright N, Macreadie PI. A Continental-Scale Assessment of Density, Size, Distribution and Historical Trends of Farm Dams Using Deep Learning Convolutional Neural Networks. Remote Sens. (Internet). 2021 Feb (cited 2022 Mar 27); 13(2):319. Available from: https://www.mdpi.com/2072- 4292/13/2/319. 18. Fahrig L, Baudry J, Brotons L, Burel FG, Crist TO, Fuller RJ, et al. Functional landscape heterogeneity and animal biodiversity in agricultural landscapes. Ecol Lett. 2011; 14(2):101–12. https://doi.org/10. 1111/j.1461-0248.2010.01559.x PMID: 21087380 19. Lundholm JT, Richardson PJ. Habitat analogues for reconciliation ecology in urban and industrial envi- ronments. J Appl Ecol. 2010; 47(5):966–975. 20. Oertli B., Auderset Joye D., Castella E., Juge R., Cambin D., & Lachavanne J.-B. (2002). Does size matter? The relationship between pond area and biodiversity. Biological Conservation, 104(1), 59–70. https://doi.org/10.1016/S0006-3207(01)00154-9 21. Morden R, Horne A, Bond NR, Nathan R, Olden JD. Small artificial impoundments have big implications for hydrology and freshwater biodiversity. Front Ecol Environ. 2022 Mar; 20(3). https://doi.org/10.1002/ fee.2454 22. Berg MD, Popescu SC, Wilcox TM, Angerer JP, Rhodes JJ, McAlister JS, et al. Small farm ponds: over- looked features with important impacts on watershed sediment transport. J Am Water Resour Assoc. 2016 Feb; 52(1):67–76. https://doi.org/10.1111/1752-1688.12369 23. Fluet-Chouinard E., Stocker B.D., Zhang Z. et al. Extensive global wetland loss over the past three cen-

Trang 15 · Đoạn 37Vị trí nguồn

turies. Nature 614, 281–286 (2023). https://doi.org/10.1038/s41586-022-05572-6 PMID: 36755174 24. Jeffries MJ. Ponds and the importance of their history: an audit of pond numbers, turnover and the rela- tionship between the origins of ponds and their contemporary plant communities in south-east Northum- berland, UK. Hydrobiologia. 2012; 689(1):11–21. https://doi.org/10.1007/s10750-011-0678-4 25. Williams P., Biggs J., Crowe A., Murphy J., Nicolet P., Weatherby A., & Dunbar M. (2010). Countryside Survey: Ponds Report from 2007. NERC Centre for Ecology. 26. Sebastia´n-Gonza´lez E, Sa´ nchez-Zapata JA, Botella F. Agricultural ponds as alternative habitat for waterbirds: spatial and temporal patterns of abundance and management strategies. European Journal of Wildlife Research. 2010; 56(1):11–20. https://doi.org/10.1007/s10344-009-0288-x 27. Lewis-Phillips J, Brooks S, Sayer CD, McCrea R, Siriwardena G, Axmacher JC. Pond management enhances the local abundance and species richness of farmland bird communities. Agric Ecosyst Envi- ron. 2019; 273:130–140. 28. Knutson MG, Richardson WB, Reineke DM, Gray BR, Parmelee JR, Weick SE. Agricultural ponds sup- port amphibian populations. Ecol Appl. 2004; 14(3):669–684. 29. Fehlinger L, Mathieu-Resuge M, Pilecky M, et al. Export of dietary lipids via emergent insects from eutrophic fishponds. Hydrobiologia. 2023; 850:3241–3256. https://doi.org/10.1007/s10750-022-05040- 2 PMID: 37397168 30. Lewis B. Farm Dams: Planning, Construction and Maintenance. Collingwood: Landlinks; 2002.

Trang 15 · Đoạn 38Vị trí nguồn

31. Boardman J, Foster IDL. The potential significance of the breaching of small farm dams in the Sneeu- berg region, South Africa. J Soils Sediments. 2011; 11(8):1456–1465. https://doi.org/10.1007/s11368- 011-0425-5 PLOS ONE The ecological and biodiversity conservation values of farm dams PLOS ONE | https://doi.org/10.1371/journal.pone.0303504 May 13, 2024 15 / 18

Trang 16 · Đoạn 39Vị trí nguồn

32. Compton LV. Farm and ranch ponds. J Wildl Manage. 1952 Jul; 16(3):238–42. https://doi.org/10.2307/ 3796706 33. Chumchal MM, Drenner RW. An environmental problem hidden in plain sight? Small human-made ponds, emergent insects, and mercury contamination of biota in the Great Plains. Environ Toxicol Chem. 2015 Jun; 34(6):1197–205. https://doi.org/10.1002/etc.2954 PMID: 26013117. 34. Clifford CC, Heffernan JB. Artificial Aquatic Ecosystems. Water. 2018 Aug 10; 10(8):1096. https://doi. org/10.3390/w10081096 35. Markwell Fellows. Habitat and biodiversity of on-farm water storages: a case study in Southeast Queensland, Australia. Environ Manage. 2008 Feb; 41(2):234–49. https://doi.org/10.1007/s00267-007- 9037-7 PMID: 18040736 36. Mitsch W, Gosselink J. Wetlands. 5th ed. Wiley Press; 2015. 37. Wei P, Wu Y, Ai R, Tie M, Duan Y, Yuan Z. Artificial ponds can be ecological traps for amphibians: A case study from Chuxiong Prefecture, Yunnan, China. Biological Conservation. 2023;109945. https:// doi.org/10.1016/j.biocon.2023.109945 38. Wisz M. S., Hijmans R. J., Li J., Peterson A. T., Graham C. H., Guisan A., & Group N. P. S. D. W. (2008). Effects of sample size on the performance of species distribution models. Diversity and Distribu- tions, 14(5), 763–773. https://doi.org/10.1111/j.1472-4642.2008.00482.x 39. Cunningham RL D. Approaches to Landscape Scale Inference and Study Design. Curr Landscape Ecol Rep. 2017; 2:42–50. https://doi.org/10.1007/s40823-017-0005-5 40. Westgate MJ, Barton PS, Lindenmayer DB, Andrew NR. Quantifying shifts in topic popularity over 44

Trang 16 · Đoạn 40Vị trí nguồn

years of Austral Ecology. Austral Ecology. 2020 Sep; 45(6):663–71. 41. Roberts ME, Stewart BM, Tingley D. stm: An R Package for Structural Topic Models. Journal of Statisti- cal Software. 2019; 91(2):1–40. https://doi.org/10.18637/jss.v091.i02 42. McGuinness LA, Higgins JPT. Risk-of-bias VISualization (robvis): An R package and Shiny web app for visualizing risk-of-bias assessments. Res Syn Meth. 2020;1–7. https://doi.org/10.1002/jrsm.1411 PMID: 32336025 43. Wickham H. C., Winston; Lionel Henry; Pedersen Thomas Lin; Takahashi Kohske; Wilke Claus; Woo Kara; Yutani Hiroaki; Dunnington Dewey; RStudio. (2021). ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics (Version 3.3.5). Retrieved from https://cran.r-project.org/web/ packages/ggplot2/index.html. 44. Gaston KJ, Spicer JI. Biodiversity: An Introduction. Wiley; 2013. 45. Hill MJ, Biggs J, Thornhill I, Briers RA, Gledhill DG, White JC, et al. Urban ponds as an aquatic biodiver- sity resource in modified landscapes. Glob Chang Biol. 2017; 23(3):986–99. https://doi.org/10.1111/ gcb.13401 PMID: 27476680 46. Hill MJ, Wood PJ. The macroinvertebrate biodiversity and conservation value of garden and field ponds along a rural-urban gradient. Fundamental and Applied Limnology / Archiv fu¨ r Hydrobiologie. 2014; 185 (1):107–19. https://doi.org/10.1127/fal/2014/0612 47. Johnson CN, Balmford A, Brook BW, Buettel JC, Galetti M, Guangchun L, et al. Biodiversity losses and conservation responses in the Anthropocene. Science. 2017; 356(6335):270–5. https://doi.org/10. 1126/science.aam9317 PMID: 28428393